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1

How do ecologists select and use indicator species to monitor ecological change? Insights from 14 years of publication in Ecological Indicators

Siddig, Ahmed A.H., Ellison, Aaron M., Ochs, Alison, Villar-Leeman, Claudia, Lau, Matthew K.

Journal:

Ecological Indicators

Year:

2016

Language:

english

File:

PDF, 1.40 MB

english, 2016

2

Palaeoceanographic controls on spatial redox distribution over the Yangtze Platform during the Ediacaran-Cambrian transition

Och, Lawrence M., Cremonese, Lorenzo, Shields-Zhou, Graham A., Poulton, Simon W., Struck, Ulrich, Ling, Hongfei, Li, Da, Chen, Xi, Manning, Christina, Thirlwall, Matthew, Strauss, Harald, Zhu, Maoyan,

Journal:

Sedimentology (Wiley)

Year:

2016

Language:

english

File:

PDF, 2.45 MB

english, 2016

3

Automated classification of lung bronchovascular anatomy in CT using AdaBoost

Robert A. Ochs, Jonathan G. Goldin, Fereidoun Abtin, Hyun J. Kim, Kathleen Brown, Poonam Batra, Donald Roback, Michael F. McNitt-Gray, Matthew S. Brown

Journal:

Medical Image Analysis

Year:

2007

Language:

english

File:

PDF, 787 KB

english, 2007

4

Sounding board: diabetes mellitus in the elderly: a truly heterogeneous entity?

Sanjay Ratnakant, Matthew E. Ochs, Solomon S. Solomon

Journal:

Diabetes, Obesity and Metabolism

Year:

2003

Language:

english

File:

PDF, 130 KB

english, 2003

5

Genetic variants inCOX-2, non-steroidal anti-inflammatory drugs, and breast cancer risk: the Western New York Exposures and Breast Cancer (WEB) Study

Theodore M. Brasky, Matthew R. Bonner, Kirsten B. Moysich, Heather M. Ochs-Balcom, Catalin Marian, Christine B. Ambrosone, Jing Nie, Meng Hua Tao, Stephen B. Edge, Maurizio Trevisan, Peter G. Shields,

Journal:

Breast Cancer Research and Treatment

Year:

2011

Language:

english

File:

PDF, 225 KB

english, 2011

6

Identification of a Protein in Sera of Normal Humans That Inhibits Fibroblast Chemotactic and Random Migration In Vitro.

Ochs, Matthew E., Postlethwaite, Arnold E., Kang, Andrew H.

Journal:

The Journal of Investigative Dermatology

Year:

1987

File:

PDF, 3.72 MB

1987

7

Btk/Tec kinases regulate sustained increases in intracellular Ca2+ following B-cell receptor activation

Fluckiger, Anne-Catherine, Li, Zuomei, Kato, Roberta M., Wahl, Matthew I., Ochs, Hans D., Longnecker, Richard, Kinet, Jean-Pierre, Witte, Owen N., Scharenberg, Andrew M., Rawlings, David J.

Journal:

The EMBO Journal

Year:

1998

Language:

english

File:

PDF, 666 KB

english, 1998

8

Extracellular Matrix as an Inductive Template for Temporomandibular Joint Meniscus Reconstruction: A Pilot Study

Bryan N. Brown, William L. Chung, Matthew Pavlick, Serafim Reppas, Mark W. Ochs, Alan J. Russell, Stephen F. Badylak

Journal:

Journal of Oral and Maxillofacial Surgery

Year:

2011

Language:

english

File:

PDF, 12.15 MB

english, 2011

9

Optimizing the concentration of hydroxyethylstarch in a novel intestinal-specific preservation solution

Matthew S. Kokotilo, Jodi Carter, Aducio Thiesen, Ming H. Chen, Angela Ochs, Rachel G. Khadaroo, Thomas A. Churchill

Journal:

Year:

2010

Language:

english

File:

PDF, 1.73 MB

english, 2010

10

Carbon and strontium isotope evolution of seawater across the Ediacaran–Cambrian transition: Evidence from the Xiaotan section, NE Yunnan, South China

Li, Da, Ling, Hong-Fei, Shields-Zhou, Graham A., Chen, Xi, Cremonese, Lorenzo, Och, Lawrence, Thirlwall, Matthew, Manning, Christina J.

Journal:

Precambrian Research

Year:

2013

Language:

english

File:

PDF, 3.88 MB

english, 2013

11

Inductive, Scaffold-Based, Regenerative Medicine Approach to Reconstruction of the Temporomandibular Joint Disk

Brown, Bryan N., Chung, William L., Almarza, Alejandro J., Pavlick, Matthew D., Reppas, Serafim N., Ochs, Mark W., Russell, Alan J., Badylak, Stephen F.

Journal:

Journal of Oral and Maxillofacial Surgery

Year:

2012

Language:

english

File:

PDF, 3.78 MB

english, 2012

12

Prevalence of Tracheal Collapse in an Emphysema Cohort as Measured With End-expiration CT

Ochs, Robert A., Petkovska, Iva, Kim, Hyun J., Abtin, Fereidoun, Brown, Matthew, Goldin, Jonathan

Journal:

Academic Radiology

Year:

2009

Language:

english

File:

PDF, 1.80 MB

english, 2009

13

A Young Boy With a Novel, Autosomal-Dominant Signal Transducer and Activator Of Transcription 1 (STAT1) Hypermorphic Mutation Presenting With Pneumocystis Jirovecii Pneumonia (PJP), Chronic Mucocutaneous Candidiasis (CMC), and Combined Immunodeficiency

Altman, Matthew C., Hagin, David, Buchbinder, David, Skoda-Smith, Suzanne, Ochs, Hans D., Torgerson, Troy R.

Journal:

Journal of Allergy and Clinical Immunology

Year:

2014

Language:

english

File:

PDF, 38 KB

english, 2014

14

SCVIR Annual Meeting Film Panel Session: Diagnosis and Discussion of Case 6

Bromley, Peter J., Ochs, Oliver D., Slater, Matthew, Shen, Irving, Keller, Frederick S.

Journal:

Journal of Vascular and Interventional Radiology

Year:

2001

Language:

english

File:

PDF, 1.38 MB

english, 2001

15

Redox changes in Early Cambrian black shales at Xiaotan section, Yunnan Province, South China

Och, Lawrence M., Shields-Zhou, Graham A., Poulton, Simon W., Manning, Christina, Thirlwall, Matthew F., Li, Da, Chen, Xi, Ling, Hongfei, Osborn, Tony, Cremonese, Lorenzo

Journal:

Precambrian Research

Year:

2013

Language:

english

File:

PDF, 3.19 MB

english, 2013

16

Classification of Parenchymal Abnormality in Scleroderma Lung Using a Novel Approach to Denoise Images Collected via a Multicenter Study

Kim, Hyun J., Li, Gang, Gjertson, David, Elashoff, Robert, Shah, Sumit K., Ochs, Robert, Vasunilashorn, Fah, Abtin, Fereidoun, Brown, Matthew S., Goldin, Jonathan G.

Journal:

Academic Radiology

Year:

2008

Language:

english

File:

PDF, 3.79 MB

english, 2008

17

Computer-aided Detection of Endobronchial Valves Using Volumetric CT

Ochs, Robert A., Abtin, Fereidoun, Ghurabi, Raffi, Rao, Ajay, Ahmad, Shama, Brown, Matthew, Goldin, Jonathan G.

Journal:

Academic Radiology

Year:

2009

Language:

english

File:

PDF, 1.31 MB

english, 2009

18

Edible polyelectrolyte microcapsules with water-soluble cargo assembled in organic phase

Pan, Houwen Matthew, Subramanian, Arjun, Ochs, Christopher J., Dewavrin, Jean-Yves, Beyer, Sebastian, Trau, Dieter W.

Journal:

Year:

2014

Language:

english

File:

PDF, 797 KB

english, 2014

19

Dietary lignan intake and androgen receptor expression in breast tumors

Williams, AnnaLynn M., Bonner, Matthew, Ochs-Balcom, Heather M., Hwang, Helena, Morrison, Carl, McCann, Susan E.

Journal:

Cancer Causes & Control

Year:

2015

Language:

english

File:

PDF, 198 KB

english, 2015

20

Summarizing and visualizing structural changes during the evolution of biomedical ontologies using a Diff Abstraction Network

Ochs, Christopher, Perl, Yehoshua, Geller, James, Haendel, Melissa, Brush, Matthew, Arabandi, Sivaram, Tu, Samson

Journal:

Journal of Biomedical Informatics

Year:

2015

Language:

english

File:

PDF, 6.75 MB

english, 2015

21

[IEEE 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - Washington, DC, USA (2015.11.9-2015.11.12)] 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) - The estimation of dimensionality in gene expression data using Nonnegative Matrix Factorization

Kelton, Conor J., Lee, Waishing, Rusay, Matthew, Maxian, Ondrej, Fertig, Elana J., Ochs, Michael F.

Year:

2015

Language:

english

File:

PDF, 1.33 MB

english, 2015

22

SPIE Proceedings [SPIE Medical Imaging - San Diego, CA (Saturday 16 February 2008)] Medical Imaging 2008: Computer-Aided Diagnosis - Computer aided detection of endobronchial valves

Ochs, Robert A., Giger, Maryellen L., Karssemeijer, Nico, Goldin, Jonathan G., Abtin, Fereidoun, Ghurabi, Raffi, Rao, Ajay, Ahmad, Shama, da Costa, Irene, Brown, Matthew

Year:

2008

Language:

english

File:

PDF, 596 KB

english, 2008

23

SPIE Proceedings [SPIE Medical Imaging - San Diego, CA (Saturday 16 February 2008)] Medical Imaging 2008: Physiology, Function, and Structure from Medical Images - Evaluation of airway measurements in phantom parenchyma and soft tissue regions

Ochs, Robert A., Hu, Xiaoping P., Clough, Anne V., Kim, Hyun J., Goldin, Jonathan G., McNitt-Gray, Michael F., Brown, Matthew S.

Year:

2008

Language:

english

File:

PDF, 429 KB

english, 2008

24

SPIE Proceedings [SPIE Medical Imaging - San Diego, CA (Saturday 17 February 2007)] Medical Imaging 2007: Image Processing - Multiscale shape features for classification of bronchovascular anatomy in CT using AdaBoost

Ochs, Robert A., Pluim, Josien P. W., Reinhardt, Joseph M., Goldin, Jonathan G., Abtin, Fereidoun, Kim, Hyun J., Brown, Kathleen, Batra, Poonam, Roback, Donald, McNitt-Gray, Michael F., Brown, Matthew

Year:

2007

Language:

english

File:

PDF, 696 KB

english, 2007

25

Who should we feed? A Western Trauma Association multi-institutional study of enteral nutrition in the open abdomen after injury

Burlew, Clay Cothren, Moore, Ernest E., Cuschieri, Joseph, Jurkovich, Gregory J., Codner, Panna, Nirula, Ram, Millar, D., Cohen, Mitchell J., Kutcher, Matthew E., Haan, James, MacNew, Heather G., Ochs

Journal:

The Journal of Trauma Injury Infection and Critical Care

Year:

2012

Language:

english

File:

PDF, 351 KB

english, 2012

26

SPIE Proceedings [SPIE Intelligent Systems & Advanced Manufacturing - Pittsburgh, PA (Tuesday 14 October 1997)] Telemanipulator and Telepresence Technologies IV - Programmable ubiquitous telerobotic devices

Doherty, Michael, Greene, Matthew, Keaton, David, Och, Christian, Seidl, Matthew L., Waite, William, Zorn, Benjamin G., Stein, Matthew R.

Year:

1997

Language:

english

File:

PDF, 1.45 MB

english, 1997

27

SPIE Proceedings [SPIE Medical Imaging - San Diego, CA (Saturday 11 February 2006)] Medical Imaging 2006: Image Processing - The influence of CT dose and reconstruction parameters on automated detection of small pulmonary nodules

Ochs, Robert, Reinhardt, Joseph M., Pluim, Josien P. W., Angel, Erin, Boedeker, Kirsten, Petkovska, Iva, Panknin, Christoph, Goldin, Jonathan, Aberle, Denise, McNitt-Gray, Michael, Brown, Matthew

Year:

2006

Language:

english

File:

PDF, 426 KB

english, 2006

28

SPIE Proceedings [SPIE Medical Imaging - San Diego, CA (Saturday 17 February 2007)] Medical Imaging 2007: Computer-Aided Diagnosis - Forming a reference standard from LIDC data: impact of reader agreement on reported CAD performance

Ochs, Robert, Giger, Maryellen L., Karssemeijer, Nico, Kim, Hyun J., Angel, Erin, Panknin, Christoph, McNitt-Gray, Michael, Brown, Matthew

Year:

2007

Language:

english

File:

PDF, 247 KB

english, 2007

29

The Caenorhabditis elegans NF2/Merlin Molecule NFM-1 Nonautonomously Regulates Neuroblast Migration and Interacts Genetically with the Guidance Cue SLT-1/Slit

Josephson, Matthew P., Aliani, Rana, Norris, Megan L., Ochs, Matthew E., Gujar, Mahekta, Lundquist, Erik A.

Journal:

Year:

2017

Language:

english

File:

PDF, 1.92 MB

english, 2017

30

Absence of functional fetal regulatory T cells in humans causes in utero organ-specific autoimmunity

Allenspach, Eric J., Finn, Laura S., Rendi, Mara H., Eken, Ahmet, Singh, Akhilesh K., Oukka, Mohamed, Taylor, Sean D., Altman, Matthew C., Fligner, Corinne L., Ochs, Hans D., Rawlings, David J., Torge

Journal:

Journal of Allergy and Clinical Immunology

Year:

2017

Language:

english

File:

PDF, 3.48 MB

english, 2017

31

Mass Cytometric Analysis of HIV Entry, Replication, and Remodeling in Tissue CD4+ T Cells

Cavrois, Marielle, Banerjee, Trambak, Mukherjee, Gourab, Raman, Nandhini, Hussien, Rajaa, Rodriguez, Brandon Aguilar, Vasquez, Joshua, Spitzer, Matthew H., Lazarus, Nicole H., Jones, Jennifer J., Ochs

Journal:

Year:

2017

Language:

english

File:

PDF, 5.36 MB

english, 2017

32

Toward Signaling-Driven Biomarkers Immune to Normal Tissue Contamination

Stansfield, John C., Rusay, Matthew, Shan, Roger, Kelton, Conor, Gaykalova, Daria A., Fertig, Elana J., Califano, Joseph A., Ochs, Michael F.

Journal:

Cancer Informatics

Year:

2016

Language:

english

File:

PDF, 1.32 MB

english, 2016

33

Negative Regulation of the Pseudomonas aeruginosa Outer Membrane Porin OprD Selective for Imipenem and Basic Amino Acids

Ochs, Martina M., McCusker, Matthew P., Bains, Manjeet, Hancock, Robert E. W.

Journal:

Antimicrobial Agents and Chemotherapy

Year:

1999

File:

PDF, 493 KB

1999

34

Surgical Management of the Hip in the Elderly Patient

Journal:

Clinics in Geriatric Medicine

Year:

1990

Language:

english

File:

PDF, 2.32 MB

english, 1990

35

Isolation protocol for a COVID-2019 patient requiring emergent surgical intervention: case presentation

Firstenberg, Michael S., Libby, Matthew, Ochs, Michael, Hanna, Jennifer, Mangino, Julie E., Forrester, Joseph

Journal:

Patient Safety in Surgery

Year:

2020

File:

PDF, 1.63 MB

2020

36

The Predicted RNA-Binding Protein ETR-1/CELF1 Acts in Muscles To Regulate Neuroblast Migration in Caenorhabditis elegans

Ochs, Matthew E., Josephson, Matthew P., Lundquist, Erik A.

Journal:

G3 Genes|Genome|Genetics

Year:

2020

File:

PDF, 8.87 MB

2020

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